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Sessions for Friday, July 25th, 2014
AfternoonRG1
Sessions for Saturday, July 26th, 2014
MorningBR1BR2RG2BK1
AfternoonEX1BK2
EveningM01
Sessions for Sunday, July 27th, 2014
MorningBR3BR4RG3M02TE01WS01WS02WS03WS04WS05WS06WS07WS08WS09M03M04M05BK3M07M08M09M10M12
AfternoonEX2PR1M11WS10WS11WS13WS14WS15WS17WS20BK4WS16WS18WS19M13M14M16M15
EveningS1EX3MX1R1
Sessions for Monday, July 28th, 2014
MorningBR5M17M18PR2RG4TE02TE031234SY015678BR6EX4BK59S2
AfternoonM19M20TE04TE05TE061011121314C1SY02SY03M21BK6M22M23P
EveningM24MX2TE09M25TE08TE10
Sessions for Tuesday, July 29th, 2014
MorningEX5BR8M26M27M28PR3RG5TE111516171819SY04SY0520212223BK72425S3M29
AfternoonM30M31TE12L1262728293031C2D1SY06SY0747BK8M32S5M33TE07TE13M34M35M36
EveningMX3TE19TE14
Sessions for Wednesday, July 30th, 2014
MorningBR9M37PR4RG6TE15TE1632333435SY08SY093637BK938C3
AfternoonL2TE1839404142434445S6SY10SY11M38BK1046M39R2M40S7
EveningR3
Sessions for Thursday, July 31st, 2014
MorningBR10M41
AfternoonL3L4

Presentations for Session 35

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Wednesday, July 30th
8:00 am to 12:00 pm · Pines South/Boise Centre
Session 35: Contributed Papers: Genomics / Proteomics
Presiding: Kelly Steele, Arizona State University
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35001July 30th 8:00 amSoybean Disease Resistance Genes and Their Evolutionary Divergence
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Genomics / ProteomicsOral PaperBenson, Benjamin V.; Nepal, Madhav P.; Subramanian , Senthil ; Ali, Shaukat..Disease Resistance Genes
CNL Genes
Soybean
Gene Clustering
Bioinformatics
Pericentromeric positioning
35002July 30th 8:15 amGenome Size Estimation in Medicago (Fabaceae): Independent Loss and Gain?
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Genomics / ProteomicsOral PaperSteele, Kelly; Mandakova, Terezia; Steier, Julia; Wojciechowski, Martin.Medicago
genome size
35003July 30th 8:30 amUsing a duplicated nuclear gene (phosphoglycerate kinase; PGK) to explore the phylogeny of the aquatic plant family Hydatellaceae
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Genomics / ProteomicsOral PaperLin, Qianshi; Marques, Isabel; Macfarlane, Terry D. ; Conran, John G.; Graham, Sean W..ANITA grade
gene tree
gene duplication
species tree
low-copy nuclear genes
multi-species coalescent
water lilies
35004July 30th 8:45 amPopulus tremuloides cell suspension cultures show distinct transcriptional responses for a phenylpropanoid pathway elicitor and two core pathway enzyme inhibitorsα
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Genomics / ProteomicsOral PaperTuominen , Lindsey K; Du, Lei; Payyavula, Raja; Wilson, Mark; Nyamdari, Batbayar; Harding, Scott A; Tsai, Chung-Jui.phenylpropanoids
gene expression
microarray
carbon-nitrogen metabolism
secondary metabolism
Populus
cell culture
35005July 30th 9:00 am
Canceled
Using transcriptomes for comparative gene family evolution: Examples from Apocynaceae
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Genomics / ProteomicsOral PaperStraub, Shannon; Bailey, C. Donovan; Cronn, Richard C.; Fishbein, Mark; Liston, Aaron.Transcriptome
Asclepias
Apocynaceae
gene family evolution
Comparative genomics
35006July 30th 9:15 amPolyploidy and transcriptome size: does genome doubling cause transcriptome doubling?
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Genomics / ProteomicsOral PaperCOATE, JEREMY E; Song, Michael; DOYLE , JEFF J.polyploidy
transcriptome size
gene expression
35007July 30th 9:30 amMolecular evolution and phylogenetics of the monocot order Alismatales using whole plastid genomes
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Genomics / ProteomicsOral PaperRoss, T. Gregory; Barrett, Craig; Henriquez , Claudia L; Cuenca, Argelia; Les , Donald H; DAVIS , JERROLD I; Peterson, Gitte; Stevenson, Dennis; Graham, Sean W..plastid genome
Gene loss
aquatic plants
monocots
Alismatales
35008July 30th 9:45 amBreak
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Genomics / Proteomics
35009July 30th 10:15 amThe smallest plastid genome in flowering plants found in the holoparasitic Hydnora visseri (Hydnoraceae)
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Genomics / ProteomicsOral PaperNaumann , Julia ; Der, Joshua; Honaas, Loren; Wafula, Eric; Wagner, Sarah; Ralph, Paula; Bolin, Jay; Maass, Erika; Neinhuis, Christoph; WANKE, STEFAN; dePamphilis, Claude.plastid genome
mitochondrial genome
parasitic plants
Piperales
35010July 30th 10:30 amDivergent photosynthetic pathway degradation in holoparasitic sister genera Harveya and Hyobanche (Orobanchaceae): Evidence from plastid genomes
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Genomics / ProteomicsOral PaperMorawetz, Jeffery; Barrett, Craig; Randle, Christopher.parasitic plants
plastome
Orobanchaceae
holoparasitism
hemiparasitism
parallel evolution
35011July 30th 10:45 amParallel degradation of plastid genomes in diverse lineages of mycoheterotrophic plants
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Genomics / ProteomicsOral PaperLam, Vivienne K. Y.; Merckx, Vincent; Yukawa, Tomohisa; Wulff, Adrien; Hollingsworth, Michelle; Hollingsworth, Peter; McNair, Daniel; Graham, Sean W..Mycoheterotrophy
plastid genome
Genome Evolution
35012July 30th 11:00 amPlastome reduction and rearrangement in members of the mycoheterotrophic Monotropoideae (Ericaceae)
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Genomics / ProteomicsOral PaperBroe, Michael; Freudenstein, John.plastome
mycoheterotroph
Monotropoid
35013July 30th 11:15 amInvestigating the process of plastome degradation in an early-transitional mycoheterotrophic genus, Corallorhiza (Orchidaceae)
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Genomics / ProteomicsOral PaperBarrett, Craig; Freudenstein, John; Li, Jeff; Lim, Gwynne; Mayfield-Jones, Dustin; Perez, Leticia; Pires, J. Chris; Davis, Jerrold.parasitic
chloroplast
Photosynthesis
pseudogene
deletion
coralroot
orchid
fungus
35014July 30th 11:30 amOrganellar Genome Evolution in Asarum (Aristolochiaceae)
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Genomics / ProteomicsOral PaperSinn, Brandon T.; Freudenstein, John.Asarum
Magnoliid
plastid genome
mitochondrial genome
35015July 30th 11:45 amThe root of the flowering plants, re-re-revisited
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Genomics / ProteomicsOral PaperMarques, Isabel; Les, Don ; Macfarlane, Terry D. ; Conran, John G.; Rudall, Paula; Logacheva, Maria ; Sokoloff, Dmitry D. ; Remizowa, Margarita V. ; Graham, Sean W..

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